Anyone using TextMate for sequence data?

By aaike at Fri, Feb 22 2008 12:58pm |

As TextMate seems to be quite popular among MacResearchers, I was wondering if anyone is using the software with DNA/RNA sequence files. I was especially thinking of .fasta-files and am wondering if there is a bundle for this format around somewhere.

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Mon, 2008-02-25 18:25 — CrimsonS

Yeah, I've started (barely)

Yeah, I've started (barely) making a bioinformatics bundle. So far, only FASTA is supported. Hope it's at least somewhat useful. There's also a Matlab bundle which is under development.

You can find these bundles here:
Bioinformatics and Matlab bundles

Wed, 2008-04-09 08:07 — dsadilek

TextMate bundle

I just built a TextMate bundle for sequence analysis.

Wed, 2008-04-09 17:32 — cparnot

Thanks

thanks for sharing that bundle! Maybe it will make its way into the main app!

Thu, 2008-04-10 13:10 — adamkraut

Very cool! I have been

Very cool! I have been using TextMate for a while now and often thought about adding bioinformatics capability. I like TextMate for editing PDB files since it does column selection and seeing this motivates me to work on a bundle for structure analysis. Thanks!